树鼩LCAT全长编码序列的克隆与分子特征分析
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中国医学科学院医学生物学研究所

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Molecular cloning and characterization of Lecithin cholesterol acyltransferase(LCAT) in the Chinese tree shrew(Tupaia belangeri chinensis)
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Institute of Medical Biology,Chinese Academy of Medical Sciences

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    摘要:

    获取树鼩卵磷脂胆固醇酰基转移酶(tsLCAT)基因的全长编码序列并进行分子特征分析。方法 从树鼩肝脏组织中提取总RNA,采用RACE技术克隆tsLCAT全长cDNA;利用MEGA软件构建系统发育树分析进化关系,通过ExPASy-ProtParam、SignaIP及MusiteDeep等工具预测分子特征与生物学功能,使用AlphaFold3进行蛋白质结构预测及比对;采用RT-qPCR和Western Blot检测tsLCAT在肝脏、胰腺、肾脏等11种组织中的mRNA及蛋白表达水平。结果 获得tsLCAT X1(全长1384 bp,编码440 aa)和tsLCAT X2(全长1400 bp,编码438 aa)两个转录变体,其中tsLCAT X1为主要转录本。系统发育分析显示,tsLCAT的进化关系比小鼠、大鼠等啮齿类动物更接近灵长类,tsLCAT与人类和黑猩猩LCAT的氨基酸序列一致性最高。组织表达谱显示,tsLCAT mRNA在肝脏中表达量最高,蛋白质富集在肝脏和胰腺中。结论 成功解析tsLCAT全长编码序列,系统分析其分子特征、蛋白结构及生物学功能,为树鼩作为LCAT相关疾病研究模型提供关键分子依据。

    Abstract:

    To obtain the full-length coding sequence of the tree shrew lecithin-cholesterol acyltransferase(tsLCAT) gene and perform its molecular characterization. Methods Total RNA was extracted from tree shrew liver tissue, and RACE(Rapid Amplification of cDNA Ends) technology was used to clone the full-length cDNA of tsLCAT. MEGA software was employed to construct a phylogenetic tree for evolutionary relationship analysis. Tools such as ExPASy-ProtParam, SignaIP, and MusiteDeep were used to predict molecular characteristics and biological functions, while AlphaFold3 was utilized for protein structure prediction and alignment. RT-qPCR and Western Blot were performed to detect the mRNA and protein expression levels of tsLCAT in 11 tissues including liver, pancreas, and kidney. Results Two transcript variants of tsLCAT were obtained: tsLCAT X1(full length 1384 bp, encoding 440 amino acids) and tsLCAT X2(full length 1400 bp, encoding 438 amino acids), with tsLCAT X1 being the major transcript. Phylogenetic analysis revealed that tsLCAT has a closer evolutionary relationship with primates than with rodents(such as mice and rats), and tsLCAT showed the highest amino acid sequence identity with human and chimpanzee LCAT. Tissue expression profile indicated that tsLCAT mRNA had the highest expression level in the liver, and the protein was enriched in the liver and pancreas. Conclusion The full-length coding sequence of tsLCAT was successfully obtained and characterized, with systematic analysis of its molecular characteristics, protein structure, and biological functions, providing key molecular evidence for the use of tree shrews as a research model for LCAT-related diseases.

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  • 收稿日期:2025-12-02
  • 最后修改日期:2026-01-05
  • 录用日期:2026-05-11
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